3.2.4.3.3. sklearn.ensemble.ExtraTreesClassifier¶

class sklearn.ensemble.ExtraTreesClassifier(n_estimators=100, criterion='gini', max_depth=None, min_samples_split=2, min_samples_leaf=1, min_weight_fraction_leaf=0.0, max_features='auto', max_leaf_nodes=None, min_impurity_decrease=0.0, min_impurity_split=None, bootstrap=False, oob_score=False, n_jobs=None, random_state=None, verbose=0, warm_start=False, class_weight=None, ccp_alpha=0.0, max_samples=None)[source]¶

An extra-trees classifier.

This class implements a meta estimator that fits a number of randomized decision trees (a.k.a. extra-trees) on various sub-samples of the dataset and uses averaging to improve the predictive accuracy and control over-fitting.

Read more in the User Guide.

Parameters

n_estimatorsinteger, optional (default=10)

The number of trees in the forest.

Changed in version 0.22: The default value of n_estimators changed from 10 to 100 in 0.22.

criterionstring, optional (default=”gini”)

The function to measure the quality of a split. Supported criteria are “gini” for the Gini impurity and “entropy” for the information gain.

max_depthinteger or None, optional (default=None)

The maximum depth of the tree. If None, then nodes are expanded until all leaves are pure or until all leaves contain less than min_samples_split samples.

min_samples_splitint, float, optional (default=2)

The minimum number of samples required to split an internal node:

• If int, then consider min_samples_split as the minimum number.

• If float, then min_samples_split is a fraction and ceil(min_samples_split * n_samples) are the minimum number of samples for each split.

Changed in version 0.18: Added float values for fractions.

min_samples_leafint, float, optional (default=1)

The minimum number of samples required to be at a leaf node. A split point at any depth will only be considered if it leaves at least min_samples_leaf training samples in each of the left and right branches. This may have the effect of smoothing the model, especially in regression.

• If int, then consider min_samples_leaf as the minimum number.

• If float, then min_samples_leaf is a fraction and ceil(min_samples_leaf * n_samples) are the minimum number of samples for each node.

Changed in version 0.18: Added float values for fractions.

min_weight_fraction_leaffloat, optional (default=0.)

The minimum weighted fraction of the sum total of weights (of all the input samples) required to be at a leaf node. Samples have equal weight when sample_weight is not provided.

max_featuresint, float, string or None, optional (default=”auto”)

The number of features to consider when looking for the best split:

• If int, then consider max_features features at each split.

• If float, then max_features is a fraction and int(max_features * n_features) features are considered at each split.

• If “auto”, then max_features=sqrt(n_features).

• If “sqrt”, then max_features=sqrt(n_features).

• If “log2”, then max_features=log2(n_features).

• If None, then max_features=n_features.

Note: the search for a split does not stop until at least one valid partition of the node samples is found, even if it requires to effectively inspect more than max_features features.

max_leaf_nodesint or None, optional (default=None)

Grow trees with max_leaf_nodes in best-first fashion. Best nodes are defined as relative reduction in impurity. If None then unlimited number of leaf nodes.

min_impurity_decreasefloat, optional (default=0.)

A node will be split if this split induces a decrease of the impurity greater than or equal to this value.

The weighted impurity decrease equation is the following:

N_t / N * (impurity - N_t_R / N_t * right_impurity
                    - N_t_L / N_t * left_impurity)

where N is the total number of samples, N_t is the number of samples at the current node, N_t_L is the number of samples in the left child, and N_t_R is the number of samples in the right child.

N, N_t, N_t_R and N_t_L all refer to the weighted sum, if sample_weight is passed.

New in version 0.19.

min_impurity_splitfloat, (default=1e-7)

Threshold for early stopping in tree growth. A node will split if its impurity is above the threshold, otherwise it is a leaf.

Deprecated since version 0.19: min_impurity_split has been deprecated in favor of min_impurity_decrease in 0.19. The default value of min_impurity_split will change from 1e-7 to 0 in 0.23 and it will be removed in 0.25. Use min_impurity_decrease instead.

bootstrapboolean, optional (default=False)

Whether bootstrap samples are used when building trees. If False, the whole datset is used to build each tree.

oob_scorebool, optional (default=False)

Whether to use out-of-bag samples to estimate the generalization accuracy.

n_jobsint or None, optional (default=None)

The number of jobs to run in parallel. fit, predict, decision_path and apply are all parallelized over the trees. None means 1 unless in a joblib.parallel_backend context. -1 means using all processors. See Glossary for more details.

random_stateint, RandomState instance or None, optional (default=None)

If int, random_state is the seed used by the random number generator; If RandomState instance, random_state is the random number generator; If None, the random number generator is the RandomState instance used by np.random.

verboseint, optional (default=0)

Controls the verbosity when fitting and predicting.

warm_startbool, optional (default=False)

When set to True, reuse the solution of the previous call to fit and add more estimators to the ensemble, otherwise, just fit a whole new forest. See the Glossary.

class_weightdict, list of dicts, “balanced”, “balanced_subsample” or None, optional (default=None)

Weights associated with classes in the form {class_label: weight}. If not given, all classes are supposed to have weight one. For multi-output problems, a list of dicts can be provided in the same order as the columns of y.

Note that for multioutput (including multilabel) weights should be defined for each class of every column in its own dict. For example, for four-class multilabel classification weights should be [{0: 1, 1: 1}, {0: 1, 1: 5}, {0: 1, 1: 1}, {0: 1, 1: 1}] instead of [{1:1}, {2:5}, {3:1}, {4:1}].

The “balanced” mode uses the values of y to automatically adjust weights inversely proportional to class frequencies in the input data as n_samples / (n_classes * np.bincount(y))

The “balanced_subsample” mode is the same as “balanced” except that weights are computed based on the bootstrap sample for every tree grown.

For multi-output, the weights of each column of y will be multiplied.

Note that these weights will be multiplied with sample_weight (passed through the fit method) if sample_weight is specified.

ccp_alphanon-negative float, optional (default=0.0)

Complexity parameter used for Minimal Cost-Complexity Pruning. The subtree with the largest cost complexity that is smaller than ccp_alpha will be chosen. By default, no pruning is performed. See Minimal Cost-Complexity Pruning for details.

New in version 0.22.

max_samplesint or float, default=None

If bootstrap is True, the number of samples to draw from X to train each base estimator.

• If None (default), then draw X.shape[0] samples.

• If int, then draw max_samples samples.

• If float, then draw max_samples * X.shape[0] samples. Thus, max_samples should be in the interval (0, 1).

New in version 0.22.

Attributes

base_estimator_ExtraTreeClassifier

The child estimator template used to create the collection of fitted sub-estimators.

estimators_list of DecisionTreeClassifier

The collection of fitted sub-estimators.

classes_array of shape = [n_classes] or a list of such arrays

The classes labels (single output problem), or a list of arrays of class labels (multi-output problem).

n_classes_int or list

The number of classes (single output problem), or a list containing the number of classes for each output (multi-output problem).

feature_importances_array of shape = [n_features]

Return the feature importances (the higher, the more important the feature).

n_features_int

The number of features when fit is performed.

n_outputs_int

The number of outputs when fit is performed.

oob_score_float

Score of the training dataset obtained using an out-of-bag estimate. This attribute exists only when oob_score is True.

oob_decision_function_array of shape = [n_samples, n_classes]

Decision function computed with out-of-bag estimate on the training set. If n_estimators is small it might be possible that a data point was never left out during the bootstrap. In this case, oob_decision_function_ might contain NaN. This attribute exists only when oob_score is True.

See also

sklearn.tree.ExtraTreeClassifier

Base classifier for this ensemble.

RandomForestClassifier

Ensemble Classifier based on trees with optimal splits.

Notes

The default values for the parameters controlling the size of the trees (e.g. max_depth, min_samples_leaf, etc.) lead to fully grown and unpruned trees which can potentially be very large on some data sets. To reduce memory consumption, the complexity and size of the trees should be controlled by setting those parameter values.

References

Rc8f28bfad63f-1

P. Geurts, D. Ernst., and L. Wehenkel, “Extremely randomized trees”, Machine Learning, 63(1), 3-42, 2006.

Methods

apply(self, X)	Apply trees in the forest to X, return leaf indices.
decision_path(self, X)	Return the decision path in the forest
fit(self, X, y[, sample_weight])	Build a forest of trees from the training set (X, y).
get_params(self[, deep])	Get parameters for this estimator.
predict(self, X)	Predict class for X.
predict_log_proba(self, X)	Predict class log-probabilities for X.
predict_proba(self, X)	Predict class probabilities for X.
score(self, X, y[, sample_weight])	Returns the mean accuracy on the given test data and labels.
set_params(self, \*\*params)	Set the parameters of this estimator.

__init__(self, n_estimators=100, criterion='gini', max_depth=None, min_samples_split=2, min_samples_leaf=1, min_weight_fraction_leaf=0.0, max_features='auto', max_leaf_nodes=None, min_impurity_decrease=0.0, min_impurity_split=None, bootstrap=False, oob_score=False, n_jobs=None, random_state=None, verbose=0, warm_start=False, class_weight=None, ccp_alpha=0.0, max_samples=None)[source]¶

Initialize self. See help(type(self)) for accurate signature.

apply(self, X)[source]¶

Apply trees in the forest to X, return leaf indices.

Parameters

Xarray-like or sparse matrix, shape = [n_samples, n_features]

The input samples. Internally, its dtype will be converted to dtype=np.float32. If a sparse matrix is provided, it will be converted into a sparse csr_matrix.

Returns

X_leavesarray_like, shape = [n_samples, n_estimators]

For each datapoint x in X and for each tree in the forest, return the index of the leaf x ends up in.

decision_path(self, X)[source]¶

Return the decision path in the forest

New in version 0.18.

Parameters

Xarray-like or sparse matrix, shape = [n_samples, n_features]

The input samples. Internally, its dtype will be converted to dtype=np.float32. If a sparse matrix is provided, it will be converted into a sparse csr_matrix.

Returns

indicatorsparse csr array, shape = [n_samples, n_nodes]

Return a node indicator matrix where non zero elements indicates that the samples goes through the nodes.

n_nodes_ptrarray of size (n_estimators + 1, )

The columns from indicator[n_nodes_ptr[i]:n_nodes_ptr[i+1]] gives the indicator value for the i-th estimator.

property feature_importances_¶

Return the feature importances (the higher, the more important the

feature).

Returns

feature_importances_array, shape = [n_features]

The values of this array sum to 1, unless all trees are single node trees consisting of only the root node, in which case it will be an array of zeros.

fit(self, X, y, sample_weight=None)[source]¶

Build a forest of trees from the training set (X, y).

Parameters

Xarray-like or sparse matrix of shape = [n_samples, n_features]

The training input samples. Internally, its dtype will be converted to dtype=np.float32. If a sparse matrix is provided, it will be converted into a sparse csc_matrix.

yarray-like, shape = [n_samples] or [n_samples, n_outputs]

The target values (class labels in classification, real numbers in regression).

sample_weightarray-like, shape = [n_samples] or None

Sample weights. If None, then samples are equally weighted. Splits that would create child nodes with net zero or negative weight are ignored while searching for a split in each node. In the case of classification, splits are also ignored if they would result in any single class carrying a negative weight in either child node.

Returns

selfobject

get_params(self, deep=True)[source]¶

Get parameters for this estimator.

Parameters

deepboolean, optional

If True, will return the parameters for this estimator and contained subobjects that are estimators.

Returns

paramsmapping of string to any

Parameter names mapped to their values.

predict(self, X)[source]¶

Predict class for X.

The predicted class of an input sample is a vote by the trees in the forest, weighted by their probability estimates. That is, the predicted class is the one with highest mean probability estimate across the trees.

Parameters

Xarray-like or sparse matrix of shape = [n_samples, n_features]

The input samples. Internally, its dtype will be converted to dtype=np.float32. If a sparse matrix is provided, it will be converted into a sparse csr_matrix.

Returns

yarray of shape = [n_samples] or [n_samples, n_outputs]

The predicted classes.

predict_log_proba(self, X)[source]¶

Predict class log-probabilities for X.

The predicted class log-probabilities of an input sample is computed as the log of the mean predicted class probabilities of the trees in the forest.

Parameters

Xarray-like or sparse matrix of shape = [n_samples, n_features]

The input samples. Internally, its dtype will be converted to dtype=np.float32. If a sparse matrix is provided, it will be converted into a sparse csr_matrix.

Returns

parray of shape = [n_samples, n_classes], or a list of n_outputs

such arrays if n_outputs > 1. The class probabilities of the input samples. The order of the classes corresponds to that in the attribute classes_.

predict_proba(self, X)[source]¶

Predict class probabilities for X.

The predicted class probabilities of an input sample are computed as the mean predicted class probabilities of the trees in the forest. The class probability of a single tree is the fraction of samples of the same class in a leaf.

Parameters

Xarray-like or sparse matrix of shape = [n_samples, n_features]

The input samples. Internally, its dtype will be converted to dtype=np.float32. If a sparse matrix is provided, it will be converted into a sparse csr_matrix.

Returns

parray of shape = [n_samples, n_classes], or a list of n_outputs

such arrays if n_outputs > 1. The class probabilities of the input samples. The order of the classes corresponds to that in the attribute classes_.

score(self, X, y, sample_weight=None)[source]¶

Returns the mean accuracy on the given test data and labels.

In multi-label classification, this is the subset accuracy which is a harsh metric since you require for each sample that each label set be correctly predicted.

Parameters

Xarray-like, shape = (n_samples, n_features)

Test samples.

yarray-like, shape = (n_samples) or (n_samples, n_outputs)

True labels for X.

sample_weightarray-like, shape = [n_samples], optional

Sample weights.

Returns

scorefloat

Mean accuracy of self.predict(X) wrt. y.

set_params(self, **params)[source]¶

Set the parameters of this estimator.

The method works on simple estimators as well as on nested objects (such as pipelines). The latter have parameters of the form <component>__<parameter> so that it’s possible to update each component of a nested object.

Returns

self